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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
UCEC cis rs9473555 1 rs2501962 chr6:49453636 MUT chr6:49398994-49431031:- -0.34 -5.56 1.18E-7 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs2501963 chr6:49454281 MUT chr6:49398994-49431031:- -0.34 -5.68 6.5E-8 Folate pathway vitamin levels
UCEC cis rs10461617 1 rs252887 chr5:56166188 C5orf35 chr5:56205103-56213010:+ 0.6 6.47 1.28E-9 Type 2 diabetes
UCEC cis rs10461617 1 rs252898 chr5:56188931 C5orf35 chr5:56205103-56213010:+ 0.59 6.26 3.78E-9 Type 2 diabetes
UCEC cis rs10461617 1 rs252902 chr5:56116085 C5orf35 chr5:56205103-56213010:+ 0.52 5.8 3.66E-8 Type 2 diabetes
UCEC cis rs10461617 1 rs252904 chr5:56118733 C5orf35 chr5:56205103-56213010:+ 0.57 6.37 2.17E-9 Type 2 diabetes
UCEC cis rs10461617 1 rs252909 chr5:56121131 C5orf35 chr5:56205103-56213010:+ 0.56 6.1 8.57E-9 Type 2 diabetes
UCEC cis rs10461617 1 rs252910 chr5:56192983 C5orf35 chr5:56205103-56213010:+ 0.62 6.44 1.5E-9 Type 2 diabetes
UCEC cis rs10461617 1 rs252915 chr5:56121754 C5orf35 chr5:56205103-56213010:+ -0.59 -6.54 8.86E-10 Type 2 diabetes
UCEC cis rs10461617 1 rs252916 chr5:56121788 C5orf35 chr5:56205103-56213010:+ 0.58 6.53 9.1E-10 Type 2 diabetes
UCEC cis rs10461617 1 rs252919 chr5:56124111 C5orf35 chr5:56205103-56213010:+ 0.58 6.43 1.57E-9 Type 2 diabetes
UCEC cis rs10461617 1 rs252921 chr5:56137787 C5orf35 chr5:56205103-56213010:+ 0.61 6.85 1.7E-10 Type 2 diabetes
UCEC cis rs10461617 1 rs252922 chr5:56136343 C5orf35 chr5:56205103-56213010:+ 0.62 6.96 9.67E-11 Type 2 diabetes
UCEC cis rs10461617 1 rs2548664 chr5:56133555 C5orf35 chr5:56205103-56213010:+ 0.62 6.79 2.38E-10 Type 2 diabetes
UCEC cis rs10461617 1 rs2548665 chr5:56131805 C5orf35 chr5:56205103-56213010:+ 0.62 6.79 2.38E-10 Type 2 diabetes